Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs6701673 | chr1:89525812 | C/G | 2.59E-5 | 206 | 16.97 | 18.47 | 10.23 | KM Plot |
| KIRP | rs67040724 | chr6:27905509 | T/C | 5.53E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
| KIRP | rs67101035 | chr6:27798887 | C/G | 1.98E-7 | 214 | 16.5 | 12 | 9.77 | KM Plot |
| KIRP | rs67191473 | chr11:8552190 | A/G | 0.000403 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |
| KIRP | rs6721961 | chr2:178130037 | T/G | 2.0E-6 | 210 | 11.43 | 14.1 | 16.45 | KM Plot |
| KIRP | rs67297533 | chr6:28141253 | G/T | 2.34E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
| KIRP | rs67320655 | chr11:8519209 | G/A | 0.000466 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |
| KIRP | rs67403774 | chr3:100008139 | A/G | 4.42E-5 | 210 | 16.43 | 18.88 | 4.67 | KM Plot |
| KIRP | rs67504519 | chr10:63385415 | C/CA | 5.54E-5 | 209 | 19.35 | 10.87 | 2.8 | KM Plot |
| KIRP | rs67509210 | chr6:26354100 | G/T | 3.08E-7 | 214 | 16.47 | 13.38 | 9.77 | KM Plot |
| KIRP | rs67587359 | chr2:70410284 | T/C | 2.4E-5 | 204 | 16.93 | 4.77 | 10.83 | KM Plot |
| KIRP | rs6760492 | chr2:66237323 | C/T | 8.05E-6 | 212 | 16.45 | 11.47 | 5.12 | KM Plot |
| KIRP | rs67606528 | chr10:63421342 | TGAA/T | 0 | 209 | 18.25 | 6.83 | 3.93 | KM Plot |
| KIRP | rs6762794 | chr3:100033269 | A/G | 3.08E-5 | 212 | 16.7 | 17.13 | 4.67 | KM Plot |
| KIRP | rs6763680 | chr3:99957033 | T/C | 9.44E-9 | 213 | 16.7 | 18.47 | 4.37 | KM Plot |